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Année 2017, publications

ALLAM A, MAIGRE L, VERGALLI J, DUMONT E, CINQUIN B, ALVES DE SOUSA R, PAJOVIC J, PINET E, SMITH N, HERBEUVAL JP, REFREGIERS M, ARTAUD I, PAGES JM. Microspectrofluorimetry to dissect the permeation of ceftazidime in Gram-negative bacteria. Sci Rep. 2017 Apr 20;7(1):986. doi: 10.1038/s41598-017-00945-8.

ANDRIO, E., LOTTE, R., HAMAOUI, D., CHERFILS, J., DOYE, A., DAUGAARD, M., ... & LEMICHEZ, E. (2017). Identification of cancer-associated missense mutations in hace1 that impair cell growth control and Rac1 ubiquitylation. Scientific Reports, 7.

AROCK M. A new therapeutic advance for symptomatic systemic mastocytosis? Lancet. 2017 Jan 6. pii: S0140-6736(16)31655-5. doi: 10.1016/S0140-6736(16)31655-5.

BAUD, A., AYMÉ, L., GONNET, F., SALARD, I., GOHON, Y., JOLIVET, P., BRODOLIN, K., DA SILVA, P., GIULIANI, A., SCLAVI, B.... & CHARDOT, T. (2017). SOLEIL shining on the solution-state structure of biomacromolecules by synchrotron X-ray footprinting at the Metrology beamline. Journal of Synchrotron Radiation, 24(3).

BAUDIN M, CINQUIN B, SCLAVI B, PAREAU D, LOPES F. Understanding the fundamental mechanisms of biofilms development and dispersal: BIAM (Biofilm Intensity and Architecture Measurement), a new tool for studying biofilms as a function of their architecture and fluorescence intensity. J Microbiol Methods. 2017 Sep;140:47-57. doi: 10.1016/j.mimet.2017.06.021. Epub 2017 Jul 2.

BENLEULMI MS, MATYSIAK J, ROBERT X, MISKEY C, MAURO E, LAPAILLERIE D, LESBATS P, CHAIGNEPAIN S, HENRIQUEZ DR, CALMELS C, OLADOSU O, THIERRY E, LEON O, LAVIGNE M, ANDREOLA ML, DELELIS O, IVICS Z, RUFF M, GOUET P, PARISSI V. Modulation of the functional association between the HIV-1 intasome and the nucleosome by histone amino-terminal tails. Retrovirology. 2017 Nov 28;14(1):54. doi: 10.1186/s12977-017-0378-x.

BUI, A. T., HUANG, M. E., HAVARD, M., LAURENT-TCHENIO, F., DAUTRY, F., & TCHENIO, T. (2017). Transient exposure to androgens induces a remarkable self-sustained quiescent state in dispersed prostate cancer cells. Cell Cycle, 1-15.Microspec-trouorimetry to dissect the permeation of ceftazidime in Gram-negative bacteria.  Scientic Reports

BURY-MONÉ, S., & SCLAVI, B. (2017). Stochasticity of gene expression as a motor of epigenetics in bacteria: from individual to collective behavior. Research in Microbiology.

CHENNOUFI R, MAHUTEAU-BETZER F, TAUC P, TEULADE-FICHOU MP, DEPREZ E. Triphenylamines Induce Cell Death Upon 2-Photon Excitation. Mol Imaging. 2017 Jan 01;16:1536012117714164. doi: 10.1177/1536012117714164

DEIANA M., POKLADEK Z., MATCZYSZYN K., MLYNARZ P., BUCKLE M. AND SAMOC M. Effective control of the intrinsic DNA morphology by photosensitive polyamines. J. Mater. Chem. B, 2017, 5, 1028-1038 DOI: 10.1039/C6TB02732F

DEVINEAU S, ZARGARIAN L, RENAULT JP, PIN S. Structure and Function of Adsorbed Hemoglobin on Silica Nanoparticles: Relationship between the Adsorption Process and the Oxygen Binding Properties. Langmuir. 2017 Apr 4;33(13):3241-3252. doi: 10.1021/acs.langmuir.6b04281.

DIDIER P. ; RAZAN F. ; CAPLAIN E. ; MICHIEL M.; DELAMARCHE C.; NOGUES C.; LE HUEROU J.Y.; SERFATY S.; LARZABAL P.  Rheological monitoring of tau protein polymerisation with acoustic waves sensor. IET Electronics Letters Volume 53, Issue 5, 02 March 2017, p. 298 - 300
DOI:  10.1049/el.2016.3400

DOS SANTOS C, HAMADAT S, LE SAUX K, NEWTON C, MAZOUNI M, ZARGARIAN L, MIRO-PADOVANI M, ZADIGUE P, DELBE J, HAMMA-KOURBALI Y, AMICHE M. Studies of the antitumor mechanism of action of dermaseptin B2, a multifunctional cationic antimicrobial peptide, reveal a partial implication of cell surface glycosaminoglycans. PLoS One. 2017 Aug 10;12(8):e0182926. doi: 10.1371/journal.pone.0182926. eCollection 2017.

ELBAHNSI, A., RETUREAU, R., BAADEN, M., HARTMANN, B., & OGUEY, C.  Holding the nucleosome together: A quantitative description of the DNA-histone interface in solution. Journal of Chemical Theory and Computation. 2017

FERRANDEZ Y., ZHANG W., PEUROIS F., AKENDENGUE L., BLANGY A., ZEGHOUF M., CHERFILS J. Allosteric inhibition of the guanine nucleotide exchange factor Dock5 by a small molecule. (2017) Sci. Rep.

GERMINI D, TSFASMAN T, KLIBI M, EL-AMINE R, PICHUGIN A, IAROVAIA O, BILHOU-NABERA C, SUBRA F, SAADA YB, SUKHANOVA A, BOUTBOUL D, RAPHAËL M, WIELS J, RAZIN S, BURY-MONÉ S, OKSENHENDLER E, LIPINSKI M, VASSETZKY Y. HIV Tat induces a prolonged MYC relocalization next to IGH in circulating B-cells. Leukemia. 2017 Mar 31. doi: 10.1038/leu.2017.106.

GIOVANNERCOLE F, MERIGOUX C, ZAMPARELLI C, VERZILI D, GRASSINI G, BUCKLE M, VACHETTE P, DE BIASE D. On the effect of alkaline pH and cofactor availability in the conformational and oligomeric state of Escherichia coli glutamate decarboxylase. Protein Eng Des Sel. 2017 Jan 5. doi: 10.1093/protein/gzw076

KARANDUR D., NAWZROTEK A., KURIYAN J., CHERFILS J. Multiple interactions between an Arf/ArfGEF complex and charged lipids determine activation kinetics on the membrane (2017) PNAS 114, 11416-11421.

KILIN V, GAVVALA K, BARTHES NP, MICHEL BY, SHIN D, BOUDIER C, MAUFFRET O, YASHCHUK V, MOUSLI M, RUFF M, GRANGER F, EILER S, BRONNER C, TOR Y, BURGER A, MÉLY Y. Dynamics of Methylated Cytosine Flipping by UHRF1. J Am Chem Soc. 2017 Feb 15;139(6):2520-2528. doi: 10.1021/jacs.7b00154.

LEH H, KHODR A, BOUGER MC, SCLAVI B, RIMSKY S, BURY-MONÉ S. Bacterial-Chromatin Structural Proteins Regulate the Bimodal Expression of the Locus of Enterocyte Effacement (LEE) Pathogenicity Island in Enteropathogenic Escherichia coli.  MBio. 2017 Aug 8;8(4). pii: e00773-17. doi: 10.1128/mBio.00773-17.

LIN W, MA J, NONG D, XU C, ZHANG B, LI J, JIA Q, DOU S, YE F, XI X, LU Y, LI M. Helicase Stepping Investigated with One-Nucleotide Resolution Fluorescence Resonance Energy Transfer. Phys Rev Lett. 2017 Sep 29;119(13):138102. doi: 10.1103/PhysRevLett.119.138102.

LIN C, POYER S, ZARGARIAN L, SALPIN JY, FOSSE P, MAUFFRET O, XIE J. Identification of acylation products in SHAPE chemistry. Bioorg Med Chem Lett. 2017 Apr 1. pii: S0960-894X(17)30361-X. doi: 10.1016/j.bmcl.2017.03.096.

LYBERG, KATARINA; ALI, HANI ABDULKADIR; GROOTENS, JENNINE; ET AL. Histone deacetylase inhibitor SAHA mediates mast cell death and epigenetic silencing of constitutively active D816V KIT in systemic mastocytosis ONCOTARGET   Volume: 8   Issue: 6   Pages: 9647-9659

MALET I, SUBRA F, CHARPENTIER C, COLLIN G, DESCAMPS D, CALVEZ V, MARCELIN AG, DELELIS O. Mutations Located outside the Integrase Gene Can Confer Resistance to HIV-1 Integrase Strand Transfer Inhibitors. MBio. 2017 Sep 26;8(5). pii: e00922-17. doi: 10.1128/mBio.00922-17. PMID: 28951475 Free PMC Article

MATYSIAK J, LESBATS P, MAURO E, LAPAILLERIE D, DUPUY JW, LOPEZ AP, BENLEULMI MS, CALMELS C, ANDREOLA ML, RUFF M, LLANO M, DELELIS O, LAVIGNE M, PARISSI V. Modulation of chromatin structure by the FACT histone chaperone complex regulates HIV-1 integration. Retrovirology. 2017 Jul 28;14(1):39. doi: 10.1186/s12977-017-0363-4.

MERZOUG-LARABI M, SPASOJEVIC C, EYMARD M, HUGONIN C, AUCLAIR C, KARAM M. Protein kinase C inhibitor Gö6976 but not Gö6983 induces the reversion of E- to N-cadherin switch and metastatic phenotype in melanoma: identification of the role of protein kinase D1. BMC Cancer. 2017 Jan 5;17(1):12. doi: 10.1186/s12885-016-3007-5.

PETER B, BIBI S, EISENWORT G, WINGELHOFER B, BERGER D, STEFANZL G, BLATT K, HERRMANN H, HADZIJUSUFOVIC E, HOERMANN G, HOFFMANN T, SCHWAAB J, JAWHAR M, WILLMANN M, SPERR WR, ZUBER J, SOTLAR K, HORNY HP, MORIGGL R, REITER A, AROCK M, VALENT P. Drug-induced inhibition of phosphorylation of STAT5 overrides drug resistance in neoplastic mast cells. Leukemia. 2017 Nov 29. doi: 10.1038/leu.2017.338.

PEUROIS F, VEYRON S, FERRANDEZ Y, LADID I, BENABDI S, ZEGHOUF M, PEYROCHE G, CHERFILS J. Characterization of the activation of small GTPases by their GEFs on membranes using artificial membrane tethering. Biochem J. 2017 Feb 14

SHEATS J, SCLAVI B, COSENTINO LAGOMARSINO M, CICUTA P, DORFMAN KD. Role of growth rate on the orientational alignment of Escherichia coli in a slit. R Soc Open Sci. 2017 Jun 21;4(6):170463. doi: 10.1098/rsos.170463. eCollection 2017 Jun.

SHI, J., CHEN, W. F., ZHANG, B., FAN, S. H., AI, X., LIU, N. N., ... & XI, X. G. (2017). A helical bundle in the N-terminal domain of the BLM helicase mediates dimer and potentially hexamer formation. Journal of Biological Chemistry, 292(14), 5909-5920.

SYPABEKOVA MARZHAN, BEKMURZAYEVA ALIYA, WANG RONGHUI, LI YANBIN, NOGUES CLAUDE, KANAYEVA DAMIRA. Selection, characterization, and application of DNA aptamers for detection of Mycobacterium tuberculosis secreted protein MPT64. Tuberculosis Volume 104, May 2017, Pages 70-78

TALHAOUI IBTISSAM, MATKARIMOV BAKHYT T., TCHENIO THIERRY, ZHARKOV DMITRY O., SAPARBAEV MURAT K. Aberrant base excision repair pathway of oxidatively damaged DNA: Implications for degenerative diseases. Free Radical Biology and Medicine Volume 107, June 2017, Pages 266-277

TENG FY, HOU XM, FAN SH, RETY S, DOU SX, XI XG. Escherichia coli DNA polymerase I can disrupt G-quadruplex structures during DNA replication. FEBS J. 2017 Dec;284(23):4051-4065. doi: 10.1111/febs.14290. Epub 2017 Nov 8.

THIERRY E, DEPREZ E, DELELIS O. Different Pathways Leading to Integrase Inhibitors Resistance. Front Microbiol. 2017 Jan 11;7:2165. doi: 10.3389/fmicb.2016.02165. Review.

THIERRY E, LEBOURGEOIS S, SIMON F, DELELIS O, DEPREZ E. Probing Resistance Mutations in Retroviral Integrases by Direct Measurement of Dolutegravir Fluorescence. Sci Rep. 2017 Oct 25;7(1):14067. doi: 10.1038/s41598-017-14564-w.

USTUN C, WILLIAMS S, SKENDZEL S, KODAL B, AROCK M, GOTLIB J, VALLERA D, COOLEY S, FELICES M, WEISDORF D, MILLER J. Allogeneic NK cells eradicate myeloblasts but not neoplastic mast cells in systemic mastocytosis associated with acute myeloid leukemia. Am J Hematol. 2017 Feb 10. doi: 10.1002/ajh.24673.

VALENT P, AKIN C, AROCK M, BOCK C, GEORGE TI, GALLI SJ, GOTLIB J, HAFERLACH T, HOERMANN G, HERMINE O, JÄGER U, KENNER L, KREIPE H, MAJETI R, METCALFE DD, ORFAO A, REITER A, SPERR WR, STABER PB, SOTLAR K, SCHIFFER C, SUPERTI-FURGA G, HORNY HP. Proposed Terminology and Classification of Pre-Malignant Neoplastic Conditions: A Consensus Proposal.  BioMedicine. 2017 Nov 26. pii: S2352-3964(17)30467-X. doi: 10.1016/j.ebiom.2017.11.024.

VALENT P, AKIN C, HARTMANN K, GEORGE TI, SOTLAR K, PETER B, GLEIXNER KV, BLATT K, SPERR WR, MANLEY PW, HERMINE O, KLUIN-NELEMANS HC, AROCK M, HORNY HP, REITER A, GOTLIB J. Midostaurin: a magic bullet that blocks mast cell expansion and activation. Ann Oncol. 2017 Oct 1;28(10):2367-2376. doi: 10.1093/annonc/mdx290.

VALENT P, AKIN C, HARTMANN K, NILSSON G, REITER A, HERMINE O, (...), AROCK M, METCALFE DD.Advances in the Classification and Treatment of Mastocytosis: Current Status and Outlook toward the Future. Cancer Res. 2017 Mar 2. doi: 10.1158/0008-5472.CAN-16-2234.

VALENT P, SOTLAR K, BLATT K, HARTMANN K, REITER A, SADOVNIK I, SPERR WR, BETTELHEIM P, AKIN C, BAUER K, GEORGE TI, HADZIJUSUFOVIC E, WOLF D, GOTLIB J, MAHON FX, METCALFE DD, HORNY HP, AROCK M. Proposed diagnostic criteria and classification of basophilic leukemias and related disorders. Leukemia. 2017 Jan 16. doi: 10.1038/leu.2017.15. [Epub ahead of print] Review.

VERGALLI J, DUMONT E, CINQUIN B, MAIGRE L, PAJOVIC J, BACQUE E, MOUREZ M, REFREGIERS M, PAGES JM. Fluoroquinolone structure and translocation flux across bacterial membrane. Sci Rep. 2017 Aug 29;7(1):9821. doi: 10.1038/s41598-017-08775-4.

WEI XB, ZHANG B, BAZEILLE N, YU Y, LIU NN, RENE B, MAUFFRET O, XI XG.A 3'-5' exonuclease activity embedded in the helicase core domain of Candida albicans Pif1 helicase. Sci Rep. 2017 Feb 20;7:42865. doi: 10.1038/srep42865. Free PMC Article

WENXIA LIN, JIANBING MA, DAGUAN NONG, (...) XUGUANG XI, YING LU, MING LI. Helicase Stepping Investigated with One-Nucleotide Resolution Fluorescence Resonance Energy Transfer. PHYSICAL REVIEW LETTERS   Volume: 119   Issue: 13     Article Number: 138102   Published: SEP 26 2017

WU WQ, HOU XM, ZHANG B, FOSSE P, RENE B, MAUFFRET O, LI M, DOU SX, XI XG. Single-molecule studies reveal reciprocating of WRN helicase core along ssDNA during DNA unwinding. Sci Rep. 2017 Mar 7;7:43954. doi: 10.1038/srep43954.

YOU J, LI H, LU XM, LI W, WANG PY, DOU SX, XI XG. Effects of monovalent cations on folding kinetics of G-quadruplexes. Biosci Rep. 2017 Jul 12;37(4). pii: BSR20170771. doi: 10.1042/BSR20170771. Print 2017 Aug 31.

ZARGARIAN L, BEN IMEDDOURENE A, GAVVALA K, BARTHES NPF, MICHEL BY, KENFACK CA, MORELLET N, RENE B, FOSSE P, BURGER A, MELY Y, MAUFFRET O. Structural and Dynamical Impact of a Universal Fluorescent Nucleoside Analogue Inserted Into a DNA Duplex. J Phys Chem B. 2017 Dec 12. doi: 10.1021/acs.jpcb.7b08825

ZHANG YW, NONG DG, DOU SX, LI W, YAN Y, XI XG, XU CH, LI M. Iterative homology checking and non-uniform stepping during RecA-mediated strand exchange. Biochem Biophys Res Commun. 2016 Sep 23;478(3):1153-7