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Publications récentes

Equipe de Claude Nogues

2017
  1. Rheological monitoring of tau protein polymerisation with acoustic waves sensor, P Didier, F Razan, E Caplain, M Michiel, C Delamarche, C Nogues, JY Le Huerou, S Serfaty, P Larzabal; Electronics Letters 2017 53 (5), 298-300.
  2. Selection, characterization, and application of DNA aptamers for detection of Mycobacterium tuberculosis secreted protein MPT64, Marzhan Sypabekova, Aliya Bekmurzayeva, Ronghui Wang, Yanbin Li, Claude Nogues, Damira Kanayeva, Tuberculosis 2017, 104, 70-78.
  3. On the effect of alkaline pH and cofactor availability in the conformational and oligomeric state of Escherichia coli glutamate decarboxylase, F Giovannercole, C Mérigoux, C Zamparelli, D Verzili, G Grassini, M Buckle, P Vachette, D De Biase. Protein Engineering Design and Selection, 2017 30 (3): 237-246.2015

2016
  1. Akiko Hatakeyama, Brigitte Hartmann, Andrew Travers, Claude Nogues, and Malcolm BuckleSci Rep. High-resolution biophysical analysis of the dynamics of nucleosome formation 2016; 6: 27337. Published online 2016 Jun 6. doi:  10.1038/srep27337 PMCID: PMC4897087

2015

  1. Delplanque A, Wawrzynczyk D, Jaworski P, Matczyszyn K, Pawlik K, Buckle M, Nyk M, Nogues C, Samoc M. DNA base pair resolution measurements using resonance energy transfer efficiency in lanthanide doped nanoparticles. PLoS One. 2015 Mar 6;10(3)[PDF]
  2. Gordel, M et al. Z-scan studies of nonlinear optical properties of colloidal gold nanorods and nanoshells Journal of Nanophotonics 2015 9 (1), 093797-093797 
  3. Kim, S.  et al. Distinct binding modes of Agrobacterium tumefaciens VirE2 protein to ssDNA. 2015. Nucleic Acids Research 43. (13) 6579-6586.
  4. Blake T. Riley, Sebastian S. Broendum, Cyril F. Reboul, Nathan P. Cowieson, Mauricio G. S. Costa, Itamar Kass, Colin Jackson, David Perahia, Ashley M. Buckle, Sheena McGowan. Dynamic Motion and Communication in the Streptococcal C1 Phage Lysin, PlyC. PLOS ONE | DOI:10.1371/journal.pone.0140219 October 15, 2015 [PDF]

2014

  1. Gordel, M. Olesiak-Banska, J. Matczyszyn, K Nogues, K. Buckle, M. Samoc, M.  Post-synthesis reshaping of gold nanorods using a femtosecond laser. (Phys Chem Chem Phys. 2014 Jan 7;16(1):71-8. doi: 10.1039/c3cp53457j.PMID: 24220104
  2. Buckle. M. The potential role of nucleic acids in mediating autoimmune recognition events: The Alpha-Omega of Innate Immunity. Journal of Interferon and Cytokine Research  2014 (Journal of Interferon and Cytokine Research In press)
  3. Laurent F, Tchénio T, Buckle M, Hazan U, Bury-Moné S.Virology. 2014 May;456-457:28-38. doi: 10.1016/j.virol.2014.03.006. Epub 2014 Mar 28. XMRV low level of expression in human cells delays superinfection interference and allows proviral copies to accumulate. PMID: 24889222 [PubMed - indexed for MEDLINE]
  4. Delplanque, A. Henry, E. Lautru, J. Leh, H. Buckle, M. Nogues, C.  UV/Ozone Surface Treatment Increases Hydrophilicity and Enhances Functionality of SU-8 Photoresist Polymer Applied Surface Science 2014. DOI: 10.1016/j.apsusc.2014.06.053
  5. Kass, I., Hoke, D. E., Costa, M. G. S., Reboul, C. F., Porebski, B. T., Cowieson, N. P., et al. (2014). Cofactor-dependent conformational heterogeneity of GAD65 and its role in autoimmunity and neurotransmitter homeostasis. Proceedings of the National Academy of Sciences, 111(25), E2524-9. doi:10.1073/pnas.1403182111
  6. Gordel M. Olesiak-Banska, J. Kolkowski R, Matczyszyn, K. Buckle, M. and Samoc, M. Shell-thickness-dependent nonlinear optical properties of colloidal gold nanoshells J. Mater. Chem. C, (2014), DOI: 10.1039/c4tc01210k.
  7. Delezoide, C. Nogues, C. ; Castro, R. ; Lautru, J. ; Buckle, M. ; Ledoux-Rak, I. ; Zyss, J. ; Nguyen, C.T. Dual-polarization optofluidic biodetection based on polymer microring resonators IEEE 2014.
  8. Mbemba G, Henry E, Delelis O, Bouger MC, Buckle M, Mouscadet JF, Hazan U, Leh H, Bury-Moné S. Biochimie. 2014 Sep 25. pii: S0300-9084(14)00268-5. doi: 10.1016/j.biochi.2014.09.019. [Epub ahead of print] PMID: 25260582 [PubMed - as supplied by publisher]

2013


  1. Beleoken, E. Leh, H. Nogues, H. De Martin, E. Catherine Johanet, Didier Samuel, Jean-Charles Duclos-Vallée, Malcolm Buckle, Ballot, E. SPRi-based strategy to identify specific biomarkers in systemic lupus erythematosus, rhumatoid arthritis and autoimmune hepatitis. PLoS One. 2013 Dec 20;8(12):e84600. doi: 10.1371/journal.pone.0084600. eCollection 2013. PMID: 24376828

2012

  1. Nogues, C. Leh, H. Lautru, J. Delelis, O.  and Buckle, M.  Efficient antifouling surface for quantitative Surface Plasmon Resonance based biosensor analysis. PLoS One. 2012;7(9):e44287. doi: 10.1371/journal.pone.0044287. Epub 2012 Sep 12.
  2. Gordel, M. Olesiak-Banska, M. Matczyszyna, K. Nogues, K. Buckle, M. Samoc, M. Shape and size separation of gold nanoparticles using glucose gradient Density. Proc. of SPIE Vol. 8424 84242F-1 (2012).
  3. Prorok, P Saint Pierre, C. Gasparutto, D.. Federova, O S. Ischenko, A. A Leh, H. Buckle, M. Tudek, B and Saparbaev. M Highly mutagenic exocyclic DNA adducts are substrates for the human nucleotide incision repair pathway. PLoS One. 2012;7(12):e51776. doi: 10.1371/journal.pone.0051776. Epub 2012 Dec 14

Avant 2012


  1. Zielinski, M., Winter, S., Kolkowski, R., Nogues, C., Oron, D., Zyss, J., and Chauvat, D. (2011). Nanoengineering the second order susceptibility in semiconductor quantum dot heterostructures. Opt Express 19, 6657-6670.
  2. Piotr Hanczyc, Katarzyna Matczyszyn, Krzysztof Pawlik, Joanna Olesiak, Herve Leh, Malcolm Buckle. Spontaneous formation of liquid crystalline phases and phase transition in highly concentrated plasmid DNA. Liquid Crystals 2011. 38: 4, 461-468.
  3. Travers, A., Hiriart, E., Churcher, M., Caserta, M., and Di Mauro, E. (2010). The DNA sequence-dependence of nucleosome positioning in vivo and in vitro. J Biomol Struct Dyn 27, 713-724.
  4. Shukla, M.S., Syed, S.H., Montel, F., Faivre-Moskalenko, C., Bednar, J., Travers, A., Angelov, D., and Dimitrov, S. (2010). Remosomes: RSC generated non-mobilized particles with approximately 180 bp DNA loosely associated with the histone octamer. Proc Natl Acad Sci U S A 107, 1936-1941.
  5. Reddy, B.A., Bajpe, P.K., Bassett, A., Moshkin, Y.M., Kozhevnikova, E., Bezstarosti, K., Demmers, J.A., Travers, A.A., and Verrijzer, C.P. (2010). Drosophila transcription factor Tramtrack69 binds MEP1 to recruit the chromatin remodeler NuRD. Mol Cell Biol 30, 5234-5244.
  6. Nogues, C., Leh, H., Langendorf, C.G., Law, R.H., Buckle, A.M., and Buckle, M. (2010). Characterisation of peptide microarrays for studying antibody-antigen binding using surface plasmon resonance imagery. PLoS One 5, e12152.
  7. Soufi, A., Noy, P., Buckle, M., Sawasdichai, A., Gaston, K., and Jayaraman, P.S. (2009). CK2 phosphorylation of the PRH/Hex homeodomain functions as a reversible switch for DNA binding. Nucleic Acids Res 37, 3288-3300.
  8. Rogozina, A., Zaychikov, E., Buckle, M., Heumann, H., and Sclavi, B. (2009). DNA melting by RNA polymerase at the T7A1 promoter precedes the rate-limiting step at 37 degrees C and results in the accumulation of an off-pathway intermediate. Nucleic Acids Res 37, 5390-5404.
  9. Prieto, I., Kouznetsova, A., Futterer, A., Trachana, V., Leonardo, E., Alonso Guerrero, A., Cano Gamero, M., Pacios-Bras, C., Leh, H., Buckle, M., et al. (2009). Synaptonemal complex assembly and H3K4Me3 demethylation determine DIDO3 localization in meiosis. Chromosoma 118, 617-632.
  10. Lavelle, C., and Buckle, M. (2009). Nucleic acid-protein interactions: Wedding for love or circumstances? Biochimie 91, 943-950.
  11. Caserta, M., Agricola, E., Churcher, M., Hiriart, E., Verdone, L., Di Mauro, E., and Travers, A. (2009). A translational signature for nucleosome positioning in vivo. Nucleic Acids Res 37, 5309-5321.
  12. Malcolm Buckle. Plasmon Resonance revisited.Bioworld Europe 2008 01.  Pp18-21.
  13. Emeline Bouffartigues, Hervé Leh, Marielle Anger-Leroy, Sylvie Rimsky and Malcolm Buckle, Rapid coupling of Surface Plasmon Resonance (SPR and SPRi) and ProteinChip based mass spectrometry for the identification of proteins in nucleoprotein interactions. (2007) Nucleic Acids Research. 2007;35(6):e39. Epub 2007 Feb 7.
  14. Rimsky S and Buckle M. Protein-DNA Interactions in "Proteins: from Analytics to Structural Genomics", (2007) (ed. R. A. Meyers) Wiley-VCH vol 1 pp347-376.
  15. Victor V. Zinoviev, Alexey A. Evdokimov, Ernst G. Malygin, Bianca Sclavi, Malcolm Buckle and Stanley Hattman.  Differential methylation kinetics of individual target site strands by T4Dam DNA methyltransferase. Biological Chemistry 2007 Nov;388(11):1199-207
  16. Alexey A. Evdokimov, Bianca Sclavi, Victor V. Zinoviev, Ernst G. Malygin, Stanley Hattman and Malcolm Buckle, Bacteriophage T4 Dam DNA-(Adenine-N6)-methyltransferase: study of enzyme-substrate binding by rapid laser UV crosslinking. J. Biol. Chem.  (2007) Sep 7; 282(36):26067-76. Epub 2007 Jul 13.
  17. Emeline Bouffartigues, Cyril Badaut, Andrew Travers, Malcolm Buckle and Sylvie Rimsky High affinity sites direct the cooperative binding of H-NS to a regulatory element required for transcriptional silencing.  Nature Struct. Mol. Biol (2007) May; 14(5):441-8. Epub 2007 Apr 15.
  18. Bianca Sclavi, Christine M. Beatty, David S. Thach, Christine E. Fredericks, Malcolm Buckle, and Alan J. Wolfe.   The Multiple Roles of CRP at the Complex acs Promoter Depend on Activation Region 2 and a Double Role for IHF.  Mol Microbiol. 2007 Jul; 65(2):425-40.
  19. Benjamin Lang, Nicolas Blot, Emeline Bouffartigues, Malcolm Buckle, Marcel Geertz, Claudio Gualerzi, Ramesh Mavathur, Georgi Muskhelshvili, Cynthia Pon, Sylvie Rimsky, Stefano Stella, M. Madan Babu, Andrew Travers High affinity DNA binding sites for H-NS provide a molecular basis for selective silencing within proteobacterial genomes. Nucleic Acids Res. 2007;35(18):6330-7. Epub 2007 Sep 18.

Chapitres de livres

  1. Rimsky S and Buckle M. Protein-DNA Interactions in "Proteins : from Analytics to Structural Genomics", (2007) (ed. R. A. Meyers) Wiley-VCH vol 1 pp347-376.
  2. Sclavi, B. Opening the DNA at the promoter; the energetic challenge. RNA Polymerases as molecular motors (Buc, H., Strick, T., eds) Royal Society of Chemistry Book Publishing, (2008) (in press).